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Tytuł artykułu

SDPBS Web Server for Calculation of Electrostatics of Ionic Solvated Biomolecules

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EN

Abstrakty

EN
The Poisson-Boltzmann equation (PBE) is one important implicit solvent continuum model for calculating electrostatics of protein in ionic solvent. We recently developed a PBE solver library, called SDPBS, that incorporates the finite element, finite difference, solution decomposition, domain decomposition, and multigrid methods. To make SDPBS more accessible to the scientific community, we present an SDPBS web server in this paper that allows clients to visualize and manipulate the molecular structure of a biomolecule, and to calculate PBE solutions in a remote and user friendly fashion. The web server is available on the website https://lsextrnprod.uwm.edu/electrostatics/.

Wydawca

Rocznik

Tom

3

Numer

1

Opis fizyczny

Daty

otrzymano
2015-09-17
zaakceptowano
2015-11-19
online
2015-11-30

Twórcy

autor
  • Department of Mathematical Sciences, University of Wisconsin-Milwaukee, Milwaukee,
    WI 53201-0413, USA
autor
  • Department of Computer Science, University of Wisconsin-Milwaukee, Milwaukee, WI 53201-0413, USA
autor
  • Department of Mathematical Sciences, University of Wisconsin-Milwaukee, Milwaukee,
    WI 53201-0413, USA
autor
  • Department of Mathematical Sciences, University of Wisconsin-Milwaukee, Milwaukee,
    WI 53201-0413, USA
autor
  • Department of Computer Science, University of Wisconsin-Milwaukee, Milwaukee, WI 53201-0413, USA

Bibliografia

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Bibliografia

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